Doutorado em Biologia da Relação Parasito-Hospedeiro (IPTSP)
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Navegando Doutorado em Biologia da Relação Parasito-Hospedeiro (IPTSP) por Por Orientador "Carneiro, Lilian Carla"
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Item Identificação de bactérias ambientais obtidas em amostras de água em comunidades quilombolas de Goiás(Universidade Federal de Goiás, 2020-03-17) Gama, Aline Rodrigues; Bataus, Luiz Artur Mendes; http://lattes.cnpq.br/5637230378599476; Carneiro, Lilian Carla; http://lattes.cnpq.br/6506744224041777; Vieira, José Daniel Gonçalves; Santos, Mônica de Oliveira; Galvão Filho, Arlindo Rodrigues; Moreira, Ellen FláviaWater quality has already been related to only aesthetic and sensory aspects, such as color, odor and taste. Today, in response to advances in understanding the relationship between contaminated water and disease, a series of regulations are proposed by the World Health Organization and the Ministry of Health that regulate the potability of water for human consumption. Based on studies and surveys on the way of life of two quilombola communities located in Aparecida de Goiânia and Silvânia, in the State of Goiás, the present work proposed the verification of the microbiological, physicochemical and toxicological quality of the water consumed by the residents of these communities. For the analyzes, samples of water from artesian wells and cisterns that supply the residences were collected and used for consumption in the Quilombola communities mentioned. A physical-chemical analysis was carried out by means of pH verification, alkalinity, hardness, physicality, turbidity, nitrate concentration and potentially toxic metals. The process of demonstration for a microbiological analysis began with the detection of coliforms followed by iso-regulation and phenotypic identification of isolated colonies, with the final recognition of two genera / species, which were subsequently submerged in the analysis of antibiotic resistance profile. The DNA of two bacterial isolates has been extracted and used for amplification and sequencing of the 16S rRNA gene. A comparison between the results obtained from the phenotypic identification and the ones based on the genomic sequence was carried out. In addition, at hyperspectral image (HSI) two isolates were obtained in camara SWIR, for classification, based on spectral signature. The results show that, as we have obtained, the Quilombola community of Aparecida de Goiânia has 16 bacterial isolates, considering that Klebsiella pneumoniae was more frequent (four isolates) with the collected points; followed by Escherichia coli (three isolated). As we have collected from the community of Silvânia, we show that there are no significant values for physicochemical analyzes and potentially toxic metals. The microbiological data showed 32 isolates, weaning, Acinetobacter lwoffii was a species more frequent (nine isolates), followed by Staphylococcus auricularis (seven isolates), with a large number of bacteria showing resistance to multiple antibiotics. Expressive were the differences generated between a phenotypic identification and genomic sequences; less than 20% two isolates achieved gender level agreement. It was possible, by means of HSI analyzes, to separate the bacterial isolates in different groups, and is not a group of isolates, in genus and species. Based on the technique used, there were no significant values for the physical-chemical and potentially toxic metal analyzes. Based on two observed results, it becomes important to perform actions, by the public power, that aim to improve water quality and in consequence of the life quality of people that live in studied communities. In addition, the use of appropriate methodologies for identifying environmentallybased bacteria, not being confidential or using phenotypic characteristics, is highlighted. Through the need for bacterial identification methodologies, it is considered that or use of HSI for this purpose, it will briefly be a common practice, for the construction of more robust data banks.Item Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica(Universidade Federal de Goiás, 2021-06-07) Silva, Lucas Luiz de Lima; Carneiro, Lilian Carla; http://lattes.cnpq.br/6506744224041777; Carneiro, Lilian Carla; Silva, Antonio Márcio Teodoro Cordeiro; Gama, Aline Rodrigues; Moraes Filho, Aroldo Vieira de; Santos, Mônica de OliveiraHelicobacter pylori (H. pylori) is a Gram-negative bacterium associated with the development of different gastropathies. The different clinical outcomes of infection by H. pylori are the result of the parasite-host relationship, and the virulence factors produced by the different strains of H. pylori are determinant in the pathogenesis of the infection. Based on the importance of the topic, the aim of this study was to assess the prevalence of H. pylori infection; compare the Polymerase Chain Reaction (PCR) technique with the histopathological examination for the detection of the microorganism; associate the genotypes of cagA, vacA and dupA virulence with the gastropathies presented by the patients and evaluate the origin of the local circulating strains. For this, gastric tissue biopsies from 117 dyspeptic patients were collected and used for DNA extraction. The histopathological examination report of the study patients was also obtained. The screening for H. pylori infection was performed using the 16S rRNA gene (hpx) and the positive H. pylori samples were subjected to the detection and sequencing of the virulence genes vacA, cagA and dupA. The dupA gene sequences obtained from the PCR were used for phylogenetic analysis. The prevalence of H. pylori infection found in this study was 64.1%, when considering only the PCR technique and 72.3% when associated with histopathological examination. A high frequency of positive cagA strains was found (80.0%). The cagA gene was detected in all strains present in patients with severe pathologies, while the isolated vacA gene was not detected in this group. Seriously ill patients had fewer virulence genes in the infecting strain. The presence of the dupA gene in the infecting strain was not associated as a risk factor or a protective factor for gastropathies, however, in women the infection by H. pylori dupA positive, increased the chance of developing gastritis by two. In addition, molecular phylogeny demonstrated that the dupA gene isolated in this study showed homology with genes from H. pylori strains isolated from western countries. The circulating strains of H. pylori in central-western Brazil show high heterogeneity in the frequency of cagA, vacA and dupA virulence genes and the combination of several virulence factors can influence the clinical outcomes of patients.